# supported distribution names are: Normal, LogNormal, Uniform, Exponential
# Modalities are: Mammo, Tomo, MRI

Scenario:
                                # use true for variable spreading
#    spread:                 true
    spread:                 false
    
    iterations:             1
    
                                # random generator behavior:      
                                # random, fixed, increasing
    generator:              fixed 
    
                                # initial seed unless using generator: random
    seed:                   1

                                # n cases to simulate
    cases:                  1000

        #      discount:              pairs of (increasing) 'begin-diam: cost'
        #   ref.age proportion  biop  specs (first diameter must be 0)
Costs:
    biop:       176   
    diameters:  0: 6438  20: 7128  50: 7701
    Discount:
        age:            50      
        proportion:      0

BreastDensities:

    #                bi-rad:  a      b      c      d
    ageGroup:    0  - 40:    .05    .30    .48    .17
    ageGroup:    40 - 50:    .06    .34    .47    .13
    ageGroup:    50 - 60:    .08    .50    .37    .05
    ageGroup:    60 - 70:    .15    .53    .29    .03
    ageGroup:    70 - * :    .18    .54    .26    .02

Modalities:

    Mammo:
        costs:          64   

        #      bi-rad:  a       b       c       d             
        dose:           3       3       3       3  
        m:             .136    .136    .136    .136

        #             ageGroup
        specificity:  0 - 40:  .961     40 - *: .965

        #       1       2       3        4    
        beta:  -4.38    .49     -1.34    -7.18

        systematicError:  0.1   

    Tomo:
        costs:         64   

        #      bi-rad:  a       b       c       d             
        dose:           3       3       3       3  
        sensitivity:    .87     .84     .73     .65   

        #             ageGroup
        specificity:  0 - 40:  .961     40 - *: .965

    MRI:
        costs:          280
        sensitivity:    .94
        specificity:    .95

Screening:

    # round: age    space separated modalities. 
    # subsequent ages must exceed the last age by at least 1
    round:     50  Mammo 
    round:     52  Mammo 
    round:     54  Mammo 
    round:     56  Mammo 
    round:     58  Mammo 
    round:     60  Mammo 
    round:     62  Mammo 
    round:     64  Mammo 
    round:     66  Mammo 
    round:     68  Mammo 
    round:     70  Mammo 
    round:     72  Mammo 
    round:     74  Mammo 

    #                   proportion:
    attendanceRate:     .8     

Tumor:

    #       beta    eta     spread  dist. 
    beir7:  0.51    -2.0    0.32    Normal
    
    Growth:
        start:  5
                          # stdev       mean    spread  dist
        selfDetect:         .70         2.92    .084    Normal
               
        DoublingTime:  
            #                   stdev   mean  spread  dist.   
            ageGroup:  1 - 50:   .61    4.38   .43    Normal     
            ageGroup: 50 - 70:   .26    5.06   .17    Normal     
            ageGroup: 70 - * :   .45    5.24   .23    Normal     

    Incidence:
        Normal:
            probability:    1
            stdDev:        21.1    
            #                   value   spread  distr.                    
            lifetimeRisk:         .226  .0053   Normal  
            meanAge:            72.9    .552    Normal 

        BRCA1:
            probability:    0
            stdDev:        16.51
            #                   value   spread  distr.                    
            lifetimeRisk:         .96
            meanAge:            53.9

         BRCA2:
            probability:    0
            stdDev:        16.51
            #                   value   spread  distr.                    
            lifetimeRisk:         .96
            meanAge:            53.9

    Survival:
        #              value        spread      dist:
        type:  a        .00004475   .000004392  Normal  
        type:  b       1.85867      .0420       Normal
        type:  c       -.271        .0101       Normal
        type:  d       2.0167       .0366       Normal


